Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 ISCU-212ENST00000547005 795 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 RALB-208ENST00000631312 311 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00575Q6W349 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC00575Q6W349 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 AL139384.1-201ENST00000612143 3047 ntBASIC11.61□□□□□ -0.55
LINC00575Q6W349 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 STX7-201ENST00000367937 1090 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 PNN-205ENST00000556530 601 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 AC006557.6-201ENST00000623071 864 ntBASIC11.61□□□□□ -0.55
LINC00575Q6W349 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 AC018695.7-201ENST00000624587 2492 ntBASIC11.61□□□□□ -0.55
LINC00575Q6W349 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00575Q6W349 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00575Q6W349 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 MFF-205ENST00000354503 1085 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 APTR-203ENST00000430801 583 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00575Q6W349 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00575Q6W349 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms