Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.46■□□□□ 0.23
NHLRC1Q6VVB1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NHLRC1Q6VVB1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.46■□□□□ 0.23
NHLRC1Q6VVB1 AL162741.1-201ENST00000565563 1558 ntBASIC16.46■□□□□ 0.23
NHLRC1Q6VVB1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NHLRC1Q6VVB1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NHLRC1Q6VVB1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 ECEL1P3-201ENST00000427961 737 ntBASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 SEC1P-202ENST00000473944 940 ntBASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 MIR3180-4-201ENST00000582223 153 ntBASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 AC112497.1-201ENST00000624824 639 ntBASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NHLRC1Q6VVB1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 AC009947.2-201ENST00000444014 672 ntBASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 NEK4P2-201ENST00000580004 1012 ntBASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 AC139713.2-201ENST00000641328 2723 ntBASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 AC073508.3-201ENST00000619697 1419 ntBASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.44■□□□□ 0.22
NHLRC1Q6VVB1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NHLRC1Q6VVB1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms