Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TREML4Q6UXN2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TREML4Q6UXN2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TREML4Q6UXN2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.03■□□□□ -0
TREML4Q6UXN2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.03■□□□□ -0
TREML4Q6UXN2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TREML4Q6UXN2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TREML4Q6UXN2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
TREML4Q6UXN2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
TREML4Q6UXN2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TREML4Q6UXN2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.02■□□□□ -0
TREML4Q6UXN2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TREML4Q6UXN2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TREML4Q6UXN2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 AC073592.3-201ENST00000625118 1834 ntBASIC15.02■□□□□ -0
TREML4Q6UXN2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.02■□□□□ -0
TREML4Q6UXN2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
TREML4Q6UXN2 AC246785.2-201ENST00000432512 513 ntBASIC15.02■□□□□ -0
TREML4Q6UXN2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.02■□□□□ -0
TREML4Q6UXN2 AC007663.1-201ENST00000438948 1240 ntBASIC15.02■□□□□ -0
TREML4Q6UXN2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TREML4Q6UXN2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.02■□□□□ -0
TREML4Q6UXN2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.02■□□□□ -0
TREML4Q6UXN2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.02■□□□□ -0
TREML4Q6UXN2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
TREML4Q6UXN2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TREML4Q6UXN2 AC011298.2-201ENST00000617989 482 ntBASIC15.02■□□□□ -0
TREML4Q6UXN2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.02■□□□□ -0
TREML4Q6UXN2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.02■□□□□ -0
TREML4Q6UXN2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TREML4Q6UXN2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TREML4Q6UXN2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15□□□□□ -0.01
TREML4Q6UXN2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TREML4Q6UXN2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15□□□□□ -0.01
TREML4Q6UXN2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms