Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 AC091076.1-201ENST00000610741 619 ntBASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFWD3Q6PCD5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RFWD3Q6PCD5 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 AL136038.3-201ENST00000561909 1096 ntBASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 AP000550.4-202ENST00000639755 178 ntBASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 AL391807.1-203ENST00000604392 2365 ntBASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.08■□□□□ 0.64
RFWD3Q6PCD5 IER3-202ENST00000376377 1350 ntBASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 AL136038.4-201ENST00000603606 1261 ntBASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 AC020763.4-201ENST00000623414 4170 ntBASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.07■□□□□ 0.64
RFWD3Q6PCD5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFWD3Q6PCD5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms