Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 GUSBP5-202ENST00000510805 1989 ntBASIC16.83■□□□□ 0.28
CACNA1BQ00975 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 HAUS4P1-201ENST00000406739 1145 ntBASIC16.83■□□□□ 0.28
CACNA1BQ00975 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1BQ00975 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1BQ00975 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CACNA1BQ00975 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.83■□□□□ 0.28
CACNA1BQ00975 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 AC092506.1-202ENST00000401022 528 ntBASIC16.82■□□□□ 0.28
CACNA1BQ00975 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 PGM5P2-202ENST00000637225 1043 ntBASIC16.82■□□□□ 0.28
CACNA1BQ00975 AP000867.4-201ENST00000641616 219 ntBASIC16.82■□□□□ 0.28
CACNA1BQ00975 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 AC008556.1-201ENST00000610908 2040 ntBASIC16.82■□□□□ 0.28
CACNA1BQ00975 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNA1BQ00975 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNA1BQ00975 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 AL138831.2-201ENST00000606564 490 ntBASIC16.81■□□□□ 0.28
CACNA1BQ00975 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNA1BQ00975 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CACNA1BQ00975 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 KRT17P7-201ENST00000451704 1104 ntBASIC16.8■□□□□ 0.28
CACNA1BQ00975 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 IGHV3-72-202ENST00000621503 303 ntBASIC16.8■□□□□ 0.28
CACNA1BQ00975 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNA1BQ00975 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNA1BQ00975 AC003669.1-201ENST00000334569 611 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms