Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.06■□□□□ 0.64
IRX4P78413 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
IRX4P78413 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IRX4P78413 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.06■□□□□ 0.64
IRX4P78413 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.05■□□□□ 0.64
IRX4P78413 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
IRX4P78413 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.05■□□□□ 0.64
IRX4P78413 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.05■□□□□ 0.64
IRX4P78413 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.05■□□□□ 0.64
IRX4P78413 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.05■□□□□ 0.64
IRX4P78413 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.05■□□□□ 0.64
IRX4P78413 ZNF444P1-201ENST00000559497 298 ntBASIC19.05■□□□□ 0.64
IRX4P78413 AL160286.2-201ENST00000567150 934 ntBASIC19.05■□□□□ 0.64
IRX4P78413 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
IRX4P78413 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
IRX4P78413 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 KRT8P8-201ENST00000434750 1448 ntBASIC19.05■□□□□ 0.64
IRX4P78413 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
IRX4P78413 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.05■□□□□ 0.64
IRX4P78413 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.05■□□□□ 0.64
IRX4P78413 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IRX4P78413 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 AC090164.3-201ENST00000610780 2143 ntBASIC19.04■□□□□ 0.64
IRX4P78413 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.04■□□□□ 0.64
IRX4P78413 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.04■□□□□ 0.64
IRX4P78413 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.04■□□□□ 0.64
IRX4P78413 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
IRX4P78413 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.04■□□□□ 0.64
IRX4P78413 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.04■□□□□ 0.64
IRX4P78413 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX4P78413 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX4P78413 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX4P78413 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.04■□□□□ 0.64
IRX4P78413 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX4P78413 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.04■□□□□ 0.64
IRX4P78413 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.04■□□□□ 0.64
IRX4P78413 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX4P78413 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.04■□□□□ 0.64
IRX4P78413 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IRX4P78413 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX4P78413 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
IRX4P78413 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
IRX4P78413 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.03■□□□□ 0.64
IRX4P78413 AL390961.4-201ENST00000623958 2535 ntBASIC19.03■□□□□ 0.64
IRX4P78413 AL512353.2-201ENST00000448759 1962 ntBASIC19.03■□□□□ 0.64
IRX4P78413 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
IRX4P78413 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.03■□□□□ 0.64
IRX4P78413 AC083849.1-201ENST00000615227 514 ntBASIC19.03■□□□□ 0.64
IRX4P78413 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 AL133373.2-201ENST00000623187 2828 ntBASIC19.03■□□□□ 0.64
IRX4P78413 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.03■□□□□ 0.64
IRX4P78413 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX4P78413 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX4P78413 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms