Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP46P62068 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.23■□□□□ 0.67
USP46P62068 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.23■□□□□ 0.67
USP46P62068 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.23■□□□□ 0.67
USP46P62068 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 AL031598.1-201ENST00000561511 1773 ntBASIC19.23■□□□□ 0.67
USP46P62068 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP46P62068 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP46P62068 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.23■□□□□ 0.67
USP46P62068 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP46P62068 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.22■□□□□ 0.67
USP46P62068 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP46P62068 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.22■□□□□ 0.67
USP46P62068 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.22■□□□□ 0.67
USP46P62068 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.22■□□□□ 0.67
USP46P62068 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.22■□□□□ 0.67
USP46P62068 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.22■□□□□ 0.67
USP46P62068 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
USP46P62068 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 KRT18P1-202ENST00000452408 1331 ntBASIC19.22■□□□□ 0.67
USP46P62068 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.22■□□□□ 0.67
USP46P62068 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.22■□□□□ 0.67
USP46P62068 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP46P62068 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP46P62068 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.21■□□□□ 0.67
USP46P62068 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP46P62068 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.21■□□□□ 0.67
USP46P62068 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
USP46P62068 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.21■□□□□ 0.67
USP46P62068 TPSP2-201ENST00000561760 610 ntBASIC19.21■□□□□ 0.67
USP46P62068 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.21■□□□□ 0.67
USP46P62068 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP46P62068 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.21■□□□□ 0.67
USP46P62068 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP46P62068 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
USP46P62068 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP46P62068 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP46P62068 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
USP46P62068 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
USP46P62068 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.66
USP46P62068 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms