Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SMIM11AP58511 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM11AP58511 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.91■□□□□ 0.3
SMIM11AP58511 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 FSCN1P1-201ENST00000568912 1481 ntBASIC16.91■□□□□ 0.3
SMIM11AP58511 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMIM11AP58511 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SMIM11AP58511 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SMIM11AP58511 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.9■□□□□ 0.3
SMIM11AP58511 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.9■□□□□ 0.3
SMIM11AP58511 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 AL023284.2-201ENST00000405850 579 ntBASIC16.9■□□□□ 0.3
SMIM11AP58511 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 AP000692.2-201ENST00000608391 879 ntBASIC16.9■□□□□ 0.3
SMIM11AP58511 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.9■□□□□ 0.3
SMIM11AP58511 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.9■□□□□ 0.3
SMIM11AP58511 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.9■□□□□ 0.3
SMIM11AP58511 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMIM11AP58511 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.89■□□□□ 0.3
SMIM11AP58511 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SMIM11AP58511 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMIM11AP58511 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.89■□□□□ 0.3
SMIM11AP58511 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.89■□□□□ 0.29
SMIM11AP58511 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 HLA-L-209ENST00000420110 1011 ntBASIC16.89■□□□□ 0.29
SMIM11AP58511 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM11AP58511 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 B3GAT3P1-201ENST00000471720 806 ntBASIC16.89■□□□□ 0.29
SMIM11AP58511 AC011506.1-201ENST00000474329 610 ntBASIC16.89■□□□□ 0.29
SMIM11AP58511 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SMIM11AP58511 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.89■□□□□ 0.29
SMIM11AP58511 RARRES2P10-201ENST00000564312 460 ntBASIC16.89■□□□□ 0.29
SMIM11AP58511 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM11AP58511 AF186192.3-201ENST00000583427 947 ntBASIC16.89■□□□□ 0.29
SMIM11AP58511 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SMIM11AP58511 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMIM11AP58511 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM11AP58511 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM11AP58511 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.89■□□□□ 0.29
SMIM11AP58511 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.89■□□□□ 0.29
SMIM11AP58511 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMIM11AP58511 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SMIM11AP58511 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SMIM11AP58511 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 KRT8P50-201ENST00000562022 1438 ntBASIC16.88■□□□□ 0.29
SMIM11AP58511 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.88■□□□□ 0.29
SMIM11AP58511 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.88■□□□□ 0.29
SMIM11AP58511 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SMIM11AP58511 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMIM11AP58511 SIRPAP1-201ENST00000448467 1770 ntBASIC16.88■□□□□ 0.29
SMIM11AP58511 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms