Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EPHA4P54764 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHA4P54764 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
EPHA4P54764 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHA4P54764 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
EPHA4P54764 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
EPHA4P54764 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 KRT17P6-201ENST00000453795 1220 ntBASIC17.61■□□□□ 0.41
EPHA4P54764 AC074051.2-201ENST00000565115 352 ntBASIC17.61■□□□□ 0.41
EPHA4P54764 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHA4P54764 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.61■□□□□ 0.41
EPHA4P54764 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHA4P54764 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHA4P54764 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EPHA4P54764 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.61■□□□□ 0.41
EPHA4P54764 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
EPHA4P54764 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.61■□□□□ 0.41
EPHA4P54764 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
EPHA4P54764 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
EPHA4P54764 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 AC004870.1-201ENST00000315132 882 ntBASIC17.6■□□□□ 0.41
EPHA4P54764 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.6■□□□□ 0.41
EPHA4P54764 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHA4P54764 FAAHP1-202ENST00000446499 1238 ntBASIC17.6■□□□□ 0.41
EPHA4P54764 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
EPHA4P54764 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHA4P54764 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.6■□□□□ 0.41
EPHA4P54764 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 AC011840.4-201ENST00000578471 627 ntBASIC17.6■□□□□ 0.41
EPHA4P54764 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHA4P54764 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EPHA4P54764 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.6■□□□□ 0.41
EPHA4P54764 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHA4P54764 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.6■□□□□ 0.41
EPHA4P54764 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
EPHA4P54764 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EPHA4P54764 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 AL024508.2-201ENST00000607749 1894 ntBASIC17.6■□□□□ 0.41
EPHA4P54764 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHA4P54764 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
EPHA4P54764 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
EPHA4P54764 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHA4P54764 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
EPHA4P54764 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHA4P54764 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHA4P54764 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EPHA4P54764 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHA4P54764 RN7SL510P-201ENST00000581311 263 ntBASIC17.59■□□□□ 0.41
EPHA4P54764 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
EPHA4P54764 LINC01711-201ENST00000598340 967 ntBASIC17.59■□□□□ 0.41
EPHA4P54764 AL353801.3-201ENST00000609898 542 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms