Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.91■□□□□ 0.14
ATP1B3P54709 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 AC096733.2-201ENST00000609937 1394 ntBASIC15.91■□□□□ 0.14
ATP1B3P54709 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.91■□□□□ 0.14
ATP1B3P54709 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
ATP1B3P54709 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.91■□□□□ 0.14
ATP1B3P54709 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.91■□□□□ 0.14
ATP1B3P54709 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.91■□□□□ 0.14
ATP1B3P54709 AC116562.2-201ENST00000507042 360 ntBASIC15.91■□□□□ 0.14
ATP1B3P54709 NUDT16P1-203ENST00000513809 620 ntBASIC15.91■□□□□ 0.14
ATP1B3P54709 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.91■□□□□ 0.14
ATP1B3P54709 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.91■□□□□ 0.14
ATP1B3P54709 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.91■□□□□ 0.14
ATP1B3P54709 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.91■□□□□ 0.14
ATP1B3P54709 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.91■□□□□ 0.14
ATP1B3P54709 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.91■□□□□ 0.14
ATP1B3P54709 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.91■□□□□ 0.14
ATP1B3P54709 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.91■□□□□ 0.14
ATP1B3P54709 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.91■□□□□ 0.14
ATP1B3P54709 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATP1B3P54709 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP1B3P54709 MYLKP1-201ENST00000509077 1580 ntBASIC15.91■□□□□ 0.14
ATP1B3P54709 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ATP1B3P54709 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.91■□□□□ 0.14
ATP1B3P54709 AC008556.1-201ENST00000610908 2040 ntBASIC15.9■□□□□ 0.14
ATP1B3P54709 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP1B3P54709 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ATP1B3P54709 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP1B3P54709 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP1B3P54709 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ATP1B3P54709 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.9■□□□□ 0.14
ATP1B3P54709 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 MFAP1P1-201ENST00000442257 1255 ntBASIC15.9■□□□□ 0.14
ATP1B3P54709 MCCD1P1-208ENST00000445732 328 ntBASIC15.9■□□□□ 0.14
ATP1B3P54709 KRT18P41-201ENST00000518924 1277 ntBASIC15.9■□□□□ 0.14
ATP1B3P54709 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.9■□□□□ 0.14
ATP1B3P54709 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATP1B3P54709 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP1B3P54709 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.9■□□□□ 0.14
ATP1B3P54709 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ATP1B3P54709 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP1B3P54709 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATP1B3P54709 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP1B3P54709 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP1B3P54709 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP1B3P54709 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ATP1B3P54709 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP1B3P54709 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP1B3P54709 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 PRORSD1P-201ENST00000295112 541 ntBASIC15.89■□□□□ 0.13
ATP1B3P54709 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP1B3P54709 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATP1B3P54709 AP000593.1-201ENST00000393668 712 ntBASIC15.89■□□□□ 0.13
ATP1B3P54709 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 RPS2P55-201ENST00000397318 883 ntBASIC15.89■□□□□ 0.13
ATP1B3P54709 AL158047.1-201ENST00000445918 881 ntBASIC15.89■□□□□ 0.13
ATP1B3P54709 AC107956.1-201ENST00000494359 873 ntBASIC15.89■□□□□ 0.13
ATP1B3P54709 AC097488.1-201ENST00000507834 756 ntBASIC15.89■□□□□ 0.13
ATP1B3P54709 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP1B3P54709 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP1B3P54709 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
ATP1B3P54709 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP1B3P54709 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP1B3P54709 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.89■□□□□ 0.13
ATP1B3P54709 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP1B3P54709 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms