Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ZNF140P52738 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ZNF140P52738 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF140P52738 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
ZNF140P52738 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF140P52738 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ZNF140P52738 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.22■□□□□ 0.51
ZNF140P52738 TMPOP1-202ENST00000424642 1267 ntBASIC18.22■□□□□ 0.51
ZNF140P52738 HLA-F-220ENST00000434407 884 ntBASIC18.22■□□□□ 0.51
ZNF140P52738 HOMER2P1-201ENST00000455653 964 ntBASIC18.22■□□□□ 0.51
ZNF140P52738 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.22■□□□□ 0.51
ZNF140P52738 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.22■□□□□ 0.51
ZNF140P52738 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.22■□□□□ 0.51
ZNF140P52738 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ZNF140P52738 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
ZNF140P52738 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF140P52738 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.21■□□□□ 0.51
ZNF140P52738 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ZNF140P52738 AL359075.1-203ENST00000462729 1002 ntBASIC18.21■□□□□ 0.51
ZNF140P52738 AC092597.1-201ENST00000487352 616 ntBASIC18.21■□□□□ 0.51
ZNF140P52738 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 AC063952.2-201ENST00000498792 1227 ntBASIC18.21■□□□□ 0.51
ZNF140P52738 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ZNF140P52738 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.21■□□□□ 0.51
ZNF140P52738 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZNF140P52738 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.21■□□□□ 0.5
ZNF140P52738 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.2■□□□□ 0.5
ZNF140P52738 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.2■□□□□ 0.5
ZNF140P52738 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.2■□□□□ 0.5
ZNF140P52738 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ZNF140P52738 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ZNF140P52738 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZNF140P52738 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF140P52738 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNF140P52738 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.19■□□□□ 0.5
ZNF140P52738 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF140P52738 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF140P52738 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ZNF140P52738 AC138028.4-201ENST00000564984 1845 ntBASIC18.19■□□□□ 0.5
ZNF140P52738 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNF140P52738 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms