Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.48□□□□□ -0.09
CDC34P49427 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CDC34P49427 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.48□□□□□ -0.09
CDC34P49427 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDC34P49427 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDC34P49427 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDC34P49427 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDC34P49427 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC34P49427 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDC34P49427 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CDC34P49427 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDC34P49427 BX276092.2-201ENST00000417668 665 ntBASIC14.47□□□□□ -0.09
CDC34P49427 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.47□□□□□ -0.09
CDC34P49427 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.47□□□□□ -0.09
CDC34P49427 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.47□□□□□ -0.09
CDC34P49427 AL121829.2-201ENST00000620908 328 ntBASIC14.47□□□□□ -0.09
CDC34P49427 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDC34P49427 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC34P49427 MYLKP1-201ENST00000509077 1580 ntBASIC14.47□□□□□ -0.09
CDC34P49427 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CDC34P49427 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC34P49427 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC34P49427 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC34P49427 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC34P49427 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDC34P49427 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDC34P49427 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDC34P49427 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CDC34P49427 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.46□□□□□ -0.09
CDC34P49427 AL023806.1-201ENST00000603994 1649 ntBASIC14.46□□□□□ -0.09
CDC34P49427 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.46□□□□□ -0.09
CDC34P49427 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms