Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CSNK1DP48730 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CSNK1DP48730 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CSNK1DP48730 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1DP48730 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1DP48730 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1DP48730 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1DP48730 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1DP48730 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1DP48730 ATP5G2P1-201ENST00000433580 426 ntBASIC18.32■□□□□ 0.52
CSNK1DP48730 KRT18P65-201ENST00000439811 1286 ntBASIC18.32■□□□□ 0.52
CSNK1DP48730 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.32■□□□□ 0.52
CSNK1DP48730 AC009154.2-201ENST00000621177 724 ntBASIC18.32■□□□□ 0.52
CSNK1DP48730 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1DP48730 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1DP48730 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1DP48730 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1DP48730 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.32■□□□□ 0.52
CSNK1DP48730 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1DP48730 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.32■□□□□ 0.52
CSNK1DP48730 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1DP48730 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CSNK1DP48730 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1DP48730 TSPY12P-201ENST00000421279 868 ntBASIC18.31■□□□□ 0.52
CSNK1DP48730 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.31■□□□□ 0.52
CSNK1DP48730 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.31■□□□□ 0.52
CSNK1DP48730 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 NPAP1P7-201ENST00000613027 823 ntBASIC18.31■□□□□ 0.52
CSNK1DP48730 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1DP48730 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1DP48730 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1DP48730 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CSNK1DP48730 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1DP48730 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1DP48730 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1DP48730 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1DP48730 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CSNK1DP48730 LINC00602-201ENST00000629776 2065 ntBASIC18.3■□□□□ 0.52
CSNK1DP48730 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1DP48730 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1DP48730 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1DP48730 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1DP48730 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CSNK1DP48730 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1DP48730 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1DP48730 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 DUTP2-201ENST00000519164 463 ntBASIC18.3■□□□□ 0.52
CSNK1DP48730 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1DP48730 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1DP48730 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms