Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.32■□□□□ 0.36
GABRA4P48169 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 LINC00265-3P-201ENST00000447588 903 ntBASIC17.32■□□□□ 0.36
GABRA4P48169 AC091607.1-201ENST00000490318 1060 ntBASIC17.32■□□□□ 0.36
GABRA4P48169 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.32■□□□□ 0.36
GABRA4P48169 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 MIR3652-201ENST00000579335 131 ntBASIC17.32■□□□□ 0.36
GABRA4P48169 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.32■□□□□ 0.36
GABRA4P48169 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.32■□□□□ 0.36
GABRA4P48169 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GABRA4P48169 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GABRA4P48169 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.31■□□□□ 0.36
GABRA4P48169 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.31■□□□□ 0.36
GABRA4P48169 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.31■□□□□ 0.36
GABRA4P48169 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
GABRA4P48169 AP005901.3-202ENST00000581653 237 ntBASIC17.31■□□□□ 0.36
GABRA4P48169 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 GMCL1P1-201ENST00000463439 1581 ntBASIC17.31■□□□□ 0.36
GABRA4P48169 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GABRA4P48169 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GABRA4P48169 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GABRA4P48169 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GABRA4P48169 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GABRA4P48169 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
GABRA4P48169 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.3■□□□□ 0.36
GABRA4P48169 IGHV3-47-201ENST00000425060 335 ntBASIC17.3■□□□□ 0.36
GABRA4P48169 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 NUS1P1-201ENST00000446295 882 ntBASIC17.3■□□□□ 0.36
GABRA4P48169 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.3■□□□□ 0.36
GABRA4P48169 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GABRA4P48169 AP000867.3-201ENST00000524675 377 ntBASIC17.3■□□□□ 0.36
GABRA4P48169 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.3■□□□□ 0.36
GABRA4P48169 AC012615.1-201ENST00000565797 1299 ntBASIC17.3■□□□□ 0.36
GABRA4P48169 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.3■□□□□ 0.36
GABRA4P48169 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.3■□□□□ 0.36
GABRA4P48169 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.3■□□□□ 0.36
GABRA4P48169 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.3■□□□□ 0.36
GABRA4P48169 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.3■□□□□ 0.36
GABRA4P48169 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GABRA4P48169 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.3■□□□□ 0.36
GABRA4P48169 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.3■□□□□ 0.36
GABRA4P48169 ESPNP-201ENST00000270691 2015 ntBASIC17.3■□□□□ 0.36
GABRA4P48169 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.3■□□□□ 0.36
GABRA4P48169 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GABRA4P48169 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.29■□□□□ 0.36
GABRA4P48169 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GABRA4P48169 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
GABRA4P48169 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.29■□□□□ 0.36
GABRA4P48169 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GABRA4P48169 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms