Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.96□□□□□ -0.01
CDX1P47902 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDX1P47902 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDX1P47902 AL596257.1-201ENST00000641463 2694 ntBASIC14.96□□□□□ -0.02
CDX1P47902 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.96□□□□□ -0.02
CDX1P47902 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CDX1P47902 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.96□□□□□ -0.02
CDX1P47902 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDX1P47902 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
CDX1P47902 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDX1P47902 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDX1P47902 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.95□□□□□ -0.02
CDX1P47902 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.95□□□□□ -0.02
CDX1P47902 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.95□□□□□ -0.02
CDX1P47902 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDX1P47902 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.95□□□□□ -0.02
CDX1P47902 AC091390.4-202ENST00000476426 537 ntBASIC14.95□□□□□ -0.02
CDX1P47902 SLC25A1P4-201ENST00000567977 778 ntBASIC14.95□□□□□ -0.02
CDX1P47902 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.95□□□□□ -0.02
CDX1P47902 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 CICP6-201ENST00000457191 2729 ntBASIC14.95□□□□□ -0.02
CDX1P47902 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDX1P47902 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDX1P47902 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 LINC01126-201ENST00000623515 1646 ntBASIC14.95□□□□□ -0.02
CDX1P47902 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.95□□□□□ -0.02
CDX1P47902 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDX1P47902 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.95□□□□□ -0.02
CDX1P47902 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.95□□□□□ -0.02
CDX1P47902 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDX1P47902 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDX1P47902 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.94□□□□□ -0.02
CDX1P47902 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.94□□□□□ -0.02
CDX1P47902 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.94□□□□□ -0.02
CDX1P47902 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 CRYGFP-201ENST00000418459 633 ntBASIC14.94□□□□□ -0.02
CDX1P47902 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.94□□□□□ -0.02
CDX1P47902 AL390955.1-201ENST00000428694 934 ntBASIC14.94□□□□□ -0.02
CDX1P47902 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 AC096733.2-201ENST00000609937 1394 ntBASIC14.94□□□□□ -0.02
CDX1P47902 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CDX1P47902 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.94□□□□□ -0.02
CDX1P47902 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.94□□□□□ -0.02
CDX1P47902 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDX1P47902 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDX1P47902 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.93□□□□□ -0.02
CDX1P47902 KRT18P22-201ENST00000402024 1347 ntBASIC14.93□□□□□ -0.02
CDX1P47902 LINC00896-202ENST00000609602 2128 ntBASIC14.93□□□□□ -0.02
CDX1P47902 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDX1P47902 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDX1P47902 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDX1P47902 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDX1P47902 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms