Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
BRCC3P46736 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.45■□□□□ 0.7
BRCC3P46736 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
BRCC3P46736 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BRCC3P46736 AC126763.1-201ENST00000552015 2118 ntBASIC19.45■□□□□ 0.7
BRCC3P46736 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.44■□□□□ 0.7
BRCC3P46736 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
BRCC3P46736 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
BRCC3P46736 TSPY12P-201ENST00000421279 868 ntBASIC19.44■□□□□ 0.7
BRCC3P46736 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 VENTXP7-201ENST00000475503 772 ntBASIC19.44■□□□□ 0.7
BRCC3P46736 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.44■□□□□ 0.7
BRCC3P46736 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
BRCC3P46736 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
BRCC3P46736 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BRCC3P46736 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.44■□□□□ 0.7
BRCC3P46736 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BRCC3P46736 LINC00602-201ENST00000629776 2065 ntBASIC19.44■□□□□ 0.7
BRCC3P46736 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 CROCCP3-202ENST00000420820 1947 ntBASIC19.43■□□□□ 0.7
BRCC3P46736 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BRCC3P46736 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.43■□□□□ 0.7
BRCC3P46736 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.43■□□□□ 0.7
BRCC3P46736 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.43■□□□□ 0.7
BRCC3P46736 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.43■□□□□ 0.7
BRCC3P46736 AC008687.5-201ENST00000593746 558 ntBASIC19.43■□□□□ 0.7
BRCC3P46736 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.43■□□□□ 0.7
BRCC3P46736 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.43■□□□□ 0.7
BRCC3P46736 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.43■□□□□ 0.7
BRCC3P46736 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BRCC3P46736 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BRCC3P46736 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
BRCC3P46736 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.42■□□□□ 0.7
BRCC3P46736 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.42■□□□□ 0.7
BRCC3P46736 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.42■□□□□ 0.7
BRCC3P46736 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.42■□□□□ 0.7
BRCC3P46736 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BRCC3P46736 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BRCC3P46736 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCC3P46736 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCC3P46736 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCC3P46736 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BRCC3P46736 AP000974.1-201ENST00000623909 2387 ntBASIC19.41■□□□□ 0.7
BRCC3P46736 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 NUS1P2-201ENST00000417358 873 ntBASIC19.41■□□□□ 0.7
BRCC3P46736 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
BRCC3P46736 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
BRCC3P46736 AC068472.1-201ENST00000474589 881 ntBASIC19.41■□□□□ 0.7
BRCC3P46736 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCC3P46736 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCC3P46736 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 AL353801.3-201ENST00000609898 542 ntBASIC19.41■□□□□ 0.7
BRCC3P46736 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCC3P46736 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.41■□□□□ 0.7
BRCC3P46736 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms