Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFC1P35251 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RFC1P35251 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.31■□□□□ 0.68
RFC1P35251 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 AC009102.3-201ENST00000623118 1491 ntBASIC19.31■□□□□ 0.68
RFC1P35251 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 MIR149-201ENST00000384879 89 ntBASIC19.31■□□□□ 0.68
RFC1P35251 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.31■□□□□ 0.68
RFC1P35251 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.31■□□□□ 0.68
RFC1P35251 AC010203.1-204ENST00000548782 407 ntBASIC19.31■□□□□ 0.68
RFC1P35251 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.31■□□□□ 0.68
RFC1P35251 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.31■□□□□ 0.68
RFC1P35251 NEK4P2-201ENST00000580004 1012 ntBASIC19.31■□□□□ 0.68
RFC1P35251 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RFC1P35251 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RFC1P35251 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.31■□□□□ 0.68
RFC1P35251 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
RFC1P35251 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.31■□□□□ 0.68
RFC1P35251 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFC1P35251 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.3■□□□□ 0.68
RFC1P35251 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.3■□□□□ 0.68
RFC1P35251 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.3■□□□□ 0.68
RFC1P35251 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.3■□□□□ 0.68
RFC1P35251 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.3■□□□□ 0.68
RFC1P35251 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RFC1P35251 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 AC141257.4-201ENST00000634557 245 ntBASIC19.3■□□□□ 0.68
RFC1P35251 AC136944.6-201ENST00000634818 245 ntBASIC19.3■□□□□ 0.68
RFC1P35251 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RFC1P35251 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RFC1P35251 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.3■□□□□ 0.68
RFC1P35251 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFC1P35251 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.29■□□□□ 0.68
RFC1P35251 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.29■□□□□ 0.68
RFC1P35251 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
RFC1P35251 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFC1P35251 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.29■□□□□ 0.68
RFC1P35251 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms