Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RPA3P35244 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RPA3P35244 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.53■□□□□ 0.56
RPA3P35244 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.53■□□□□ 0.56
RPA3P35244 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 AC106820.2-201ENST00000563775 3264 ntBASIC18.53■□□□□ 0.56
RPA3P35244 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RPA3P35244 KRT8P11-201ENST00000409686 1436 ntBASIC18.53■□□□□ 0.56
RPA3P35244 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.53■□□□□ 0.56
RPA3P35244 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RPA3P35244 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 B3GAT3P1-201ENST00000471720 806 ntBASIC18.53■□□□□ 0.56
RPA3P35244 AC011506.1-201ENST00000474329 610 ntBASIC18.53■□□□□ 0.56
RPA3P35244 AC091390.4-202ENST00000476426 537 ntBASIC18.53■□□□□ 0.56
RPA3P35244 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.53■□□□□ 0.56
RPA3P35244 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.53■□□□□ 0.56
RPA3P35244 AP003071.4-201ENST00000562276 1284 ntBASIC18.53■□□□□ 0.56
RPA3P35244 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.53■□□□□ 0.56
RPA3P35244 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.53■□□□□ 0.56
RPA3P35244 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.53■□□□□ 0.56
RPA3P35244 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.53■□□□□ 0.56
RPA3P35244 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RPA3P35244 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RPA3P35244 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RPA3P35244 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.52■□□□□ 0.56
RPA3P35244 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.52■□□□□ 0.56
RPA3P35244 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.52■□□□□ 0.56
RPA3P35244 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RPA3P35244 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.52■□□□□ 0.56
RPA3P35244 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RPA3P35244 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.52■□□□□ 0.56
RPA3P35244 AC116562.2-201ENST00000507042 360 ntBASIC18.52■□□□□ 0.56
RPA3P35244 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.52■□□□□ 0.56
RPA3P35244 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
RPA3P35244 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.52■□□□□ 0.56
RPA3P35244 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.52■□□□□ 0.56
RPA3P35244 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.52■□□□□ 0.56
RPA3P35244 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RPA3P35244 SIRPAP1-201ENST00000448467 1770 ntBASIC18.52■□□□□ 0.55
RPA3P35244 AC080080.1-201ENST00000625121 2420 ntBASIC18.52■□□□□ 0.55
RPA3P35244 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RPA3P35244 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPA3P35244 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RPA3P35244 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.52■□□□□ 0.55
RPA3P35244 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.52■□□□□ 0.55
RPA3P35244 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.51■□□□□ 0.55
RPA3P35244 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
RPA3P35244 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.51■□□□□ 0.55
RPA3P35244 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 KRT8P3-201ENST00000519669 1449 ntBASIC18.51■□□□□ 0.55
RPA3P35244 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.51■□□□□ 0.55
RPA3P35244 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RPA3P35244 FAM207BP-201ENST00000447172 505 ntBASIC18.51■□□□□ 0.55
RPA3P35244 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.51■□□□□ 0.55
RPA3P35244 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.51■□□□□ 0.55
RPA3P35244 REXO1L10P-201ENST00000615707 1290 ntBASIC18.51■□□□□ 0.55
RPA3P35244 AC130371.2-201ENST00000619443 611 ntBASIC18.51■□□□□ 0.55
RPA3P35244 REXO1L12P-201ENST00000622156 912 ntBASIC18.51■□□□□ 0.55
RPA3P35244 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.51■□□□□ 0.55
RPA3P35244 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RPA3P35244 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.51■□□□□ 0.55
RPA3P35244 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
RPA3P35244 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms