Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN6P29350 AIRN-201ENST00000601203 4374 ntBASIC17.4■□□□□ 0.38
PTPN6P29350 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PTPN6P29350 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PTPN6P29350 AC034236.2-201ENST00000606662 1610 ntBASIC17.39■□□□□ 0.38
PTPN6P29350 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
PTPN6P29350 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN6P29350 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN6P29350 LTB4R2-202ENST00000528054 3092 ntBASIC17.39■□□□□ 0.38
PTPN6P29350 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN6P29350 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTPN6P29350 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTPN6P29350 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN6P29350 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN6P29350 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN6P29350 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPN6P29350 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN6P29350 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN6P29350 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN6P29350 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN6P29350 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTPN6P29350 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PTPN6P29350 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN6P29350 TSPY14P-201ENST00000303979 915 ntBASIC17.38■□□□□ 0.37
PTPN6P29350 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.38■□□□□ 0.37
PTPN6P29350 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN6P29350 EGLN1P1-201ENST00000531623 762 ntBASIC17.38■□□□□ 0.37
PTPN6P29350 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPN6P29350 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTPN6P29350 MIR4674-201ENST00000582457 87 ntBASIC17.38■□□□□ 0.37
PTPN6P29350 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
PTPN6P29350 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN6P29350 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PTPN6P29350 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN6P29350 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPN6P29350 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
PTPN6P29350 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPN6P29350 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 GMCL1P1-201ENST00000463439 1581 ntBASIC17.37■□□□□ 0.37
PTPN6P29350 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 SDHAP2-201ENST00000455183 2001 ntBASIC17.37■□□□□ 0.37
PTPN6P29350 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
PTPN6P29350 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
PTPN6P29350 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTPN6P29350 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN6P29350 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms