Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
VCLP18206 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.43■□□□□ 0.54
VCLP18206 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.43■□□□□ 0.54
VCLP18206 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.43■□□□□ 0.54
VCLP18206 LINC01238-205ENST00000567549 1107 ntBASIC18.43■□□□□ 0.54
VCLP18206 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 CR769767.2-201ENST00000622735 460 ntBASIC18.43■□□□□ 0.54
VCLP18206 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 HEIH-201ENST00000623091 1652 ntBASIC18.43■□□□□ 0.54
VCLP18206 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
VCLP18206 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 ANO7L1-203ENST00000602586 1720 ntBASIC18.43■□□□□ 0.54
VCLP18206 AC012313.1-201ENST00000593393 3059 ntBASIC18.43■□□□□ 0.54
VCLP18206 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.43■□□□□ 0.54
VCLP18206 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.43■□□□□ 0.54
VCLP18206 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VCLP18206 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.42■□□□□ 0.54
VCLP18206 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.42■□□□□ 0.54
VCLP18206 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.42■□□□□ 0.54
VCLP18206 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.42■□□□□ 0.54
VCLP18206 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 KRT8P32-201ENST00000512863 1461 ntBASIC18.42■□□□□ 0.54
VCLP18206 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.42■□□□□ 0.54
VCLP18206 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.42■□□□□ 0.54
VCLP18206 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.42■□□□□ 0.54
VCLP18206 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.42■□□□□ 0.54
VCLP18206 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.42■□□□□ 0.54
VCLP18206 AL049597.2-201ENST00000565575 961 ntBASIC18.42■□□□□ 0.54
VCLP18206 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.42■□□□□ 0.54
VCLP18206 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCLP18206 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.41■□□□□ 0.54
VCLP18206 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VCLP18206 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VCLP18206 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.41■□□□□ 0.54
VCLP18206 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VCLP18206 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.41■□□□□ 0.54
VCLP18206 AC009947.2-201ENST00000444014 672 ntBASIC18.41■□□□□ 0.54
VCLP18206 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.41■□□□□ 0.54
VCLP18206 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.41■□□□□ 0.54
VCLP18206 AC067852.2-201ENST00000590513 2313 ntBASIC18.41■□□□□ 0.54
VCLP18206 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.41■□□□□ 0.54
VCLP18206 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VCLP18206 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VCLP18206 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.41■□□□□ 0.54
VCLP18206 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.41■□□□□ 0.54
VCLP18206 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCLP18206 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VCLP18206 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.4■□□□□ 0.54
VCLP18206 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.4■□□□□ 0.54
VCLP18206 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 AC036111.1-201ENST00000533973 1582 ntBASIC18.4■□□□□ 0.54
VCLP18206 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 AK4P3-201ENST00000418260 669 ntBASIC18.4■□□□□ 0.54
VCLP18206 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.4■□□□□ 0.54
VCLP18206 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.4■□□□□ 0.54
VCLP18206 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
VCLP18206 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCLP18206 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
VCLP18206 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
VCLP18206 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
VCLP18206 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
VCLP18206 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
VCLP18206 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
VCLP18206 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.39■□□□□ 0.53
VCLP18206 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms