Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC233263.1-201ENST00000578059 224 ntBASIC17.34■□□□□ 0.37
NCK1P16333 PHGDH-209ENST00000641074 1780 ntBASIC17.34■□□□□ 0.37
NCK1P16333 AC133041.1-202ENST00000642053 222 ntBASIC17.34■□□□□ 0.37
NCK1P16333 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NCK1P16333 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.33■□□□□ 0.37
NCK1P16333 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCK1P16333 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NCK1P16333 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCK1P16333 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCK1P16333 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.33■□□□□ 0.37
NCK1P16333 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NCK1P16333 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.33■□□□□ 0.36
NCK1P16333 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.33■□□□□ 0.36
NCK1P16333 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
NCK1P16333 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.33■□□□□ 0.36
NCK1P16333 AC004980.1-204ENST00000429707 299 ntBASIC17.33■□□□□ 0.36
NCK1P16333 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.33■□□□□ 0.36
NCK1P16333 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
NCK1P16333 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.33■□□□□ 0.36
NCK1P16333 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 AC131212.4-201ENST00000623606 975 ntBASIC17.33■□□□□ 0.36
NCK1P16333 AL023875.1-201ENST00000640777 796 ntBASIC17.33■□□□□ 0.36
NCK1P16333 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.33■□□□□ 0.36
NCK1P16333 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCK1P16333 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
NCK1P16333 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NCK1P16333 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
NCK1P16333 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NCK1P16333 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.32■□□□□ 0.36
NCK1P16333 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCK1P16333 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 KRASP1-201ENST00000407852 552 ntBASIC17.32■□□□□ 0.36
NCK1P16333 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.32■□□□□ 0.36
NCK1P16333 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.32■□□□□ 0.36
NCK1P16333 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.32■□□□□ 0.36
NCK1P16333 AC069544.1-201ENST00000609399 999 ntBASIC17.32■□□□□ 0.36
NCK1P16333 AL445675.2-201ENST00000620291 557 ntBASIC17.32■□□□□ 0.36
NCK1P16333 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NCK1P16333 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NCK1P16333 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCK1P16333 GMCL1P1-201ENST00000463439 1581 ntBASIC17.32■□□□□ 0.36
NCK1P16333 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCK1P16333 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.31■□□□□ 0.36
NCK1P16333 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCK1P16333 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NCK1P16333 AC084018.2-201ENST00000613093 2607 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms