Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL390961.4-201ENST00000623958 2535 ntBASIC19.24■□□□□ 0.67
PDGFRAP16234 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDGFRAP16234 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDGFRAP16234 BCL2-203ENST00000589955 5011 ntBASIC19.24■□□□□ 0.67
PDGFRAP16234 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.23■□□□□ 0.67
PDGFRAP16234 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFRAP16234 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFRAP16234 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFRAP16234 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFRAP16234 AC093677.2-201ENST00000600169 1863 ntBASIC19.23■□□□□ 0.67
PDGFRAP16234 RNF152P1-201ENST00000397754 604 ntBASIC19.23■□□□□ 0.67
PDGFRAP16234 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.23■□□□□ 0.67
PDGFRAP16234 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.23■□□□□ 0.67
PDGFRAP16234 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFRAP16234 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFRAP16234 GCSHP2-201ENST00000560971 527 ntBASIC19.23■□□□□ 0.67
PDGFRAP16234 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.23■□□□□ 0.67
PDGFRAP16234 AL441883.1-201ENST00000566170 1045 ntBASIC19.23■□□□□ 0.67
PDGFRAP16234 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.23■□□□□ 0.67
PDGFRAP16234 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFRAP16234 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.23■□□□□ 0.67
PDGFRAP16234 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PDGFRAP16234 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFRAP16234 ABALON-201ENST00000629058 1903 ntBASIC19.23■□□□□ 0.67
PDGFRAP16234 AC007613.1-201ENST00000572811 2597 ntBASIC19.23■□□□□ 0.67
PDGFRAP16234 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDGFRAP16234 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDGFRAP16234 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
PDGFRAP16234 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.22■□□□□ 0.67
PDGFRAP16234 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.22■□□□□ 0.67
PDGFRAP16234 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.22■□□□□ 0.67
PDGFRAP16234 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.22■□□□□ 0.67
PDGFRAP16234 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.22■□□□□ 0.67
PDGFRAP16234 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PDGFRAP16234 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 TSPY5P-201ENST00000426936 936 ntBASIC19.22■□□□□ 0.67
PDGFRAP16234 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.22■□□□□ 0.67
PDGFRAP16234 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.22■□□□□ 0.67
PDGFRAP16234 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.22■□□□□ 0.67
PDGFRAP16234 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.22■□□□□ 0.67
PDGFRAP16234 MIR3917-201ENST00000580971 93 ntBASIC19.22■□□□□ 0.67
PDGFRAP16234 NTF6B-201ENST00000591913 560 ntBASIC19.22■□□□□ 0.67
PDGFRAP16234 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PDGFRAP16234 AL031432.5-201ENST00000641059 760 ntBASIC19.22■□□□□ 0.67
PDGFRAP16234 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PDGFRAP16234 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.22■□□□□ 0.67
PDGFRAP16234 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDGFRAP16234 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDGFRAP16234 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PDGFRAP16234 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.21■□□□□ 0.67
PDGFRAP16234 AC063952.2-201ENST00000498792 1227 ntBASIC19.21■□□□□ 0.67
PDGFRAP16234 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.21■□□□□ 0.67
PDGFRAP16234 AC022616.7-201ENST00000525383 220 ntBASIC19.21■□□□□ 0.67
PDGFRAP16234 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.21■□□□□ 0.67
PDGFRAP16234 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDGFRAP16234 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.21■□□□□ 0.67
PDGFRAP16234 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
PDGFRAP16234 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms