Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL11A2P13942 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.31■■□□□ 1.16
COL11A2P13942 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
COL11A2P13942 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
COL11A2P13942 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.31■■□□□ 1.16
COL11A2P13942 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
COL11A2P13942 AC064836.3-201ENST00000607928 673 ntBASIC22.31■■□□□ 1.16
COL11A2P13942 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.31■■□□□ 1.16
COL11A2P13942 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.31■■□□□ 1.16
COL11A2P13942 LINC00602-201ENST00000629776 2065 ntBASIC22.31■■□□□ 1.16
COL11A2P13942 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.31■■□□□ 1.16
COL11A2P13942 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.31■■□□□ 1.16
COL11A2P13942 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.31■■□□□ 1.16
COL11A2P13942 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.31■■□□□ 1.16
COL11A2P13942 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
COL11A2P13942 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.31■■□□□ 1.16
COL11A2P13942 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL11A2P13942 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL11A2P13942 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
COL11A2P13942 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 AL032819.2-201ENST00000624543 2162 ntBASIC22.3■■□□□ 1.16
COL11A2P13942 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 MYLKP1-201ENST00000509077 1580 ntBASIC22.3■■□□□ 1.16
COL11A2P13942 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
COL11A2P13942 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
COL11A2P13942 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.3■■□□□ 1.16
COL11A2P13942 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL11A2P13942 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.3■■□□□ 1.16
COL11A2P13942 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.3■■□□□ 1.16
COL11A2P13942 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
COL11A2P13942 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.29■■□□□ 1.16
COL11A2P13942 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.29■■□□□ 1.16
COL11A2P13942 ELK2BP-201ENST00000415014 1224 ntBASIC22.29■■□□□ 1.16
COL11A2P13942 BX005266.1-201ENST00000473402 457 ntBASIC22.29■■□□□ 1.16
COL11A2P13942 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.29■■□□□ 1.16
COL11A2P13942 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
COL11A2P13942 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COL11A2P13942 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.29■■□□□ 1.16
COL11A2P13942 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.29■■□□□ 1.16
COL11A2P13942 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL11A2P13942 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
COL11A2P13942 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.28■■□□□ 1.16
COL11A2P13942 MIR3687-2-201ENST00000577708 61 ntBASIC22.28■■□□□ 1.16
COL11A2P13942 MIR3687-1-201ENST00000614492 61 ntBASIC22.28■■□□□ 1.16
COL11A2P13942 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.28■■□□□ 1.16
COL11A2P13942 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 AC002310.6-201ENST00000624451 1377 ntBASIC22.28■■□□□ 1.16
COL11A2P13942 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.28■■□□□ 1.16
COL11A2P13942 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.28■■□□□ 1.16
COL11A2P13942 AC211486.1-202ENST00000416371 468 ntBASIC22.28■■□□□ 1.16
COL11A2P13942 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 AC211476.1-201ENST00000503899 468 ntBASIC22.28■■□□□ 1.16
COL11A2P13942 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.28■■□□□ 1.16
COL11A2P13942 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL11A2P13942 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
COL11A2P13942 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms