Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
FAM228BP0C875 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
FAM228BP0C875 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
FAM228BP0C875 AC012317.2-201ENST00000623305 2251 ntBASIC19.55■□□□□ 0.72
FAM228BP0C875 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 LINC01126-201ENST00000623515 1646 ntBASIC19.55■□□□□ 0.72
FAM228BP0C875 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.55■□□□□ 0.72
FAM228BP0C875 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.55■□□□□ 0.72
FAM228BP0C875 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.55■□□□□ 0.72
FAM228BP0C875 KRT18P23-201ENST00000435622 1283 ntBASIC19.55■□□□□ 0.72
FAM228BP0C875 RBM17P1-201ENST00000453646 1190 ntBASIC19.55■□□□□ 0.72
FAM228BP0C875 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
FAM228BP0C875 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.55■□□□□ 0.72
FAM228BP0C875 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.55■□□□□ 0.72
FAM228BP0C875 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.55■□□□□ 0.72
FAM228BP0C875 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
FAM228BP0C875 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.54■□□□□ 0.72
FAM228BP0C875 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.54■□□□□ 0.72
FAM228BP0C875 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.54■□□□□ 0.72
FAM228BP0C875 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.54■□□□□ 0.72
FAM228BP0C875 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.54■□□□□ 0.72
FAM228BP0C875 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.54■□□□□ 0.72
FAM228BP0C875 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
FAM228BP0C875 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
FAM228BP0C875 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.54■□□□□ 0.72
FAM228BP0C875 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.54■□□□□ 0.72
FAM228BP0C875 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
FAM228BP0C875 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
FAM228BP0C875 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.53■□□□□ 0.72
FAM228BP0C875 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.53■□□□□ 0.72
FAM228BP0C875 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.53■□□□□ 0.72
FAM228BP0C875 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
FAM228BP0C875 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 SLC25A1P2-201ENST00000430693 912 ntBASIC19.53■□□□□ 0.72
FAM228BP0C875 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.53■□□□□ 0.72
FAM228BP0C875 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.53■□□□□ 0.72
FAM228BP0C875 WWOX-216ENST00000569818 525 ntBASIC19.53■□□□□ 0.72
FAM228BP0C875 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.53■□□□□ 0.72
FAM228BP0C875 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.53■□□□□ 0.72
FAM228BP0C875 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.53■□□□□ 0.72
FAM228BP0C875 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
FAM228BP0C875 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
FAM228BP0C875 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
FAM228BP0C875 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
FAM228BP0C875 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
FAM228BP0C875 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FAM228BP0C875 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
FAM228BP0C875 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FAM228BP0C875 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
FAM228BP0C875 KRT8P7-201ENST00000533003 1432 ntBASIC19.52■□□□□ 0.72
FAM228BP0C875 AC092338.2-201ENST00000568827 1415 ntBASIC19.52■□□□□ 0.72
FAM228BP0C875 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FAM228BP0C875 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
FAM228BP0C875 AC093010.1-201ENST00000473625 1624 ntBASIC19.52■□□□□ 0.72
FAM228BP0C875 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
FAM228BP0C875 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
FAM228BP0C875 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.52■□□□□ 0.72
FAM228BP0C875 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
FAM228BP0C875 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
FAM228BP0C875 TSPY17P-201ENST00000450329 467 ntBASIC19.52■□□□□ 0.72
FAM228BP0C875 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.52■□□□□ 0.72
FAM228BP0C875 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.52■□□□□ 0.72
FAM228BP0C875 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms