Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 AC104819.1-201ENST00000504587 486 ntBASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 Z69720.1-201ENST00000601483 472 ntBASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB40ALP0C0E4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 RN7SL606P-201ENST00000472779 293 ntBASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 UNC93B7-201ENST00000509439 705 ntBASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AC091304.2-201ENST00000564639 760 ntBASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AC008687.5-201ENST00000593746 558 ntBASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 LINC01711-201ENST00000598340 967 ntBASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AC233702.3-201ENST00000578656 1387 ntBASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB40ALP0C0E4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AL845331.1-201ENST00000424978 1190 ntBASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 IFNL4P1-201ENST00000607083 540 ntBASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AL592071.1-201ENST00000611956 408 ntBASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AL353692.3-201ENST00000407031 1396 ntBASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB40ALP0C0E4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 MIR149-201ENST00000384879 89 ntBASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 KRT17P6-201ENST00000453795 1220 ntBASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 VENTXP7-201ENST00000475503 772 ntBASIC17.23■□□□□ 0.35
RAB40ALP0C0E4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms