Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AGGF1P2-201ENST00000426656 2106 ntBASIC14.23□□□□□ -0.13
CXCL1P09341 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.23□□□□□ -0.13
CXCL1P09341 PCDHB17P-201ENST00000539533 2393 ntBASIC14.23□□□□□ -0.13
CXCL1P09341 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL1P09341 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL1P09341 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL1P09341 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL1P09341 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CXCL1P09341 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL1P09341 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.23□□□□□ -0.13
CXCL1P09341 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL1P09341 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.23□□□□□ -0.13
CXCL1P09341 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.23□□□□□ -0.13
CXCL1P09341 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CXCL1P09341 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 AC106886.4-201ENST00000623557 2502 ntBASIC14.22□□□□□ -0.13
CXCL1P09341 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 TFP1-202ENST00000475455 1573 ntBASIC14.22□□□□□ -0.13
CXCL1P09341 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCL1P09341 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL1P09341 FLJ13224-201ENST00000313737 1514 ntBASIC14.22□□□□□ -0.13
CXCL1P09341 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CXCL1P09341 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL1P09341 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.22□□□□□ -0.13
CXCL1P09341 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL1P09341 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.22□□□□□ -0.13
CXCL1P09341 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL1P09341 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL1P09341 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.22□□□□□ -0.13
CXCL1P09341 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CXCL1P09341 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CXCL1P09341 AC104417.2-201ENST00000562989 1793 ntBASIC14.22□□□□□ -0.13
CXCL1P09341 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
CXCL1P09341 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CXCL1P09341 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CXCL1P09341 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CXCL1P09341 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CXCL1P09341 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CXCL1P09341 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL1P09341 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL1P09341 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CXCL1P09341 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL1P09341 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL1P09341 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL1P09341 AC008694.1-202ENST00000636953 945 ntBASIC14.21□□□□□ -0.13
CXCL1P09341 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL1P09341 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL1P09341 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL1P09341 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL1P09341 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL1P09341 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL1P09341 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL1P09341 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.21□□□□□ -0.14
CXCL1P09341 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL1P09341 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL1P09341 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CXCL1P09341 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CXCL1P09341 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL1P09341 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL1P09341 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL1P09341 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL1P09341 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL1P09341 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms