Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CAPN1P07384 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.05■□□□□ 0.48
CAPN1P07384 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CAPN1P07384 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.05■□□□□ 0.48
CAPN1P07384 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CAPN1P07384 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN1P07384 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CAPN1P07384 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.04■□□□□ 0.48
CAPN1P07384 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 AC063952.2-201ENST00000498792 1227 ntBASIC18.04■□□□□ 0.48
CAPN1P07384 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 AC139887.4-201ENST00000607877 719 ntBASIC18.04■□□□□ 0.48
CAPN1P07384 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN1P07384 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN1P07384 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.04■□□□□ 0.48
CAPN1P07384 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CAPN1P07384 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.04■□□□□ 0.48
CAPN1P07384 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CAPN1P07384 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 AC008556.1-201ENST00000610908 2040 ntBASIC18.03■□□□□ 0.48
CAPN1P07384 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.03■□□□□ 0.48
CAPN1P07384 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.03■□□□□ 0.48
CAPN1P07384 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.03■□□□□ 0.48
CAPN1P07384 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.03■□□□□ 0.48
CAPN1P07384 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.03■□□□□ 0.48
CAPN1P07384 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CAPN1P07384 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 AC008622.2-201ENST00000617006 1229 ntBASIC18.03■□□□□ 0.48
CAPN1P07384 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 AC141257.4-201ENST00000634557 245 ntBASIC18.03■□□□□ 0.48
CAPN1P07384 AC136944.6-201ENST00000634818 245 ntBASIC18.03■□□□□ 0.48
CAPN1P07384 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.03■□□□□ 0.48
CAPN1P07384 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CAPN1P07384 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.03■□□□□ 0.48
CAPN1P07384 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CAPN1P07384 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.02■□□□□ 0.48
CAPN1P07384 AC005332.8-201ENST00000622750 2735 ntBASIC18.02■□□□□ 0.48
CAPN1P07384 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.02■□□□□ 0.48
CAPN1P07384 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CAPN1P07384 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms