Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
APOA4P06727 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APOA4P06727 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.38■□□□□ 0.53
APOA4P06727 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
APOA4P06727 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.38■□□□□ 0.53
APOA4P06727 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.38■□□□□ 0.53
APOA4P06727 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.38■□□□□ 0.53
APOA4P06727 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
APOA4P06727 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 KRT18P41-201ENST00000518924 1277 ntBASIC18.38■□□□□ 0.53
APOA4P06727 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.38■□□□□ 0.53
APOA4P06727 MIR3180-5-201ENST00000583743 153 ntBASIC18.38■□□□□ 0.53
APOA4P06727 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
APOA4P06727 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.38■□□□□ 0.53
APOA4P06727 KRT18P22-201ENST00000402024 1347 ntBASIC18.38■□□□□ 0.53
APOA4P06727 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.38■□□□□ 0.53
APOA4P06727 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.38■□□□□ 0.53
APOA4P06727 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.38■□□□□ 0.53
APOA4P06727 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
APOA4P06727 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOA4P06727 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.38■□□□□ 0.53
APOA4P06727 MYLKP1-201ENST00000509077 1580 ntBASIC18.38■□□□□ 0.53
APOA4P06727 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
APOA4P06727 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
APOA4P06727 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
APOA4P06727 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
APOA4P06727 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.37■□□□□ 0.53
APOA4P06727 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.37■□□□□ 0.53
APOA4P06727 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.37■□□□□ 0.53
APOA4P06727 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.37■□□□□ 0.53
APOA4P06727 MIR4674-201ENST00000582457 87 ntBASIC18.37■□□□□ 0.53
APOA4P06727 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.37■□□□□ 0.53
APOA4P06727 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
APOA4P06727 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
APOA4P06727 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
APOA4P06727 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.37■□□□□ 0.53
APOA4P06727 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOA4P06727 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.36■□□□□ 0.53
APOA4P06727 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.36■□□□□ 0.53
APOA4P06727 GNAS-203ENST00000306120 1878 ntBASIC18.36■□□□□ 0.53
APOA4P06727 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
APOA4P06727 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
APOA4P06727 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.36■□□□□ 0.53
APOA4P06727 ECEL1P2-202ENST00000465689 757 ntBASIC18.36■□□□□ 0.53
APOA4P06727 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
APOA4P06727 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 AC138028.4-201ENST00000564984 1845 ntBASIC18.36■□□□□ 0.53
APOA4P06727 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.36■□□□□ 0.53
APOA4P06727 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.36■□□□□ 0.53
APOA4P06727 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.36■□□□□ 0.53
APOA4P06727 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
APOA4P06727 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.36■□□□□ 0.53
APOA4P06727 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
APOA4P06727 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.36■□□□□ 0.53
APOA4P06727 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APOA4P06727 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.36■□□□□ 0.53
APOA4P06727 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
APOA4P06727 AP000997.3-201ENST00000623333 2250 ntBASIC18.35■□□□□ 0.53
APOA4P06727 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APOA4P06727 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.35■□□□□ 0.53
APOA4P06727 INGX-201ENST00000359239 846 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms