Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.69■□□□□ 0.58
MT-ND3P03897 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MT-ND3P03897 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND3P03897 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
MT-ND3P03897 CR392000.1-201ENST00000624770 1228 ntBASIC18.69■□□□□ 0.58
MT-ND3P03897 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND3P03897 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND3P03897 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND3P03897 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND3P03897 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MT-ND3P03897 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND3P03897 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND3P03897 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND3P03897 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-ND3P03897 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-ND3P03897 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MT-ND3P03897 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 RBM17P1-201ENST00000453646 1190 ntBASIC18.68■□□□□ 0.58
MT-ND3P03897 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-ND3P03897 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
MT-ND3P03897 REXO1L10P-201ENST00000615707 1290 ntBASIC18.68■□□□□ 0.58
MT-ND3P03897 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.68■□□□□ 0.58
MT-ND3P03897 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.68■□□□□ 0.58
MT-ND3P03897 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.68■□□□□ 0.58
MT-ND3P03897 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-ND3P03897 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-ND3P03897 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND3P03897 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND3P03897 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 KRT8P11-201ENST00000409686 1436 ntBASIC18.67■□□□□ 0.58
MT-ND3P03897 KRT8P45-201ENST00000414328 1447 ntBASIC18.67■□□□□ 0.58
MT-ND3P03897 KRT8P3-201ENST00000519669 1449 ntBASIC18.67■□□□□ 0.58
MT-ND3P03897 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.67■□□□□ 0.58
MT-ND3P03897 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND3P03897 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND3P03897 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 Z85996.1-201ENST00000494644 937 ntBASIC18.67■□□□□ 0.58
MT-ND3P03897 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.67■□□□□ 0.58
MT-ND3P03897 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MT-ND3P03897 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND3P03897 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND3P03897 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.67■□□□□ 0.58
MT-ND3P03897 AC138028.4-201ENST00000564984 1845 ntBASIC18.67■□□□□ 0.58
MT-ND3P03897 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND3P03897 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MT-ND3P03897 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.66■□□□□ 0.58
MT-ND3P03897 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.66■□□□□ 0.58
MT-ND3P03897 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND3P03897 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms