Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
USH2AO75445 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 KRT19P2-202ENST00000557173 1012 ntBASIC8.13□□□□□ -1.11
USH2AO75445 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC8.13□□□□□ -1.11
USH2AO75445 AL139288.1-201ENST00000623748 933 ntBASIC8.13□□□□□ -1.11
USH2AO75445 AC079776.2-201ENST00000641154 1609 ntBASIC8.13□□□□□ -1.11
USH2AO75445 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 ABCD1P5-201ENST00000445663 754 ntBASIC8.12□□□□□ -1.11
USH2AO75445 AC108073.2-201ENST00000464002 357 ntBASIC8.12□□□□□ -1.11
USH2AO75445 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 AC025048.6-201ENST00000634326 1161 ntBASIC8.12□□□□□ -1.11
USH2AO75445 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
USH2AO75445 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
USH2AO75445 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC8.12□□□□□ -1.11
USH2AO75445 IGHV3-65-201ENST00000523210 341 ntBASIC8.12□□□□□ -1.11
USH2AO75445 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 SPTSSB-204ENST00000617024 1292 ntBASIC8.12□□□□□ -1.11
USH2AO75445 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC8.12□□□□□ -1.11
USH2AO75445 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC8.12□□□□□ -1.11
USH2AO75445 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
USH2AO75445 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 CYP51A1P2-201ENST00000419457 1499 ntBASIC8.11□□□□□ -1.11
USH2AO75445 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
USH2AO75445 TFAMP1-201ENST00000412727 736 ntBASIC8.11□□□□□ -1.11
USH2AO75445 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 AC004835.2-201ENST00000603762 682 ntBASIC8.11□□□□□ -1.11
USH2AO75445 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 TEX21P-204ENST00000641479 1693 ntBASIC8.11□□□□□ -1.11
USH2AO75445 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 MIR1909-201ENST00000411312 80 ntBASIC8.11□□□□□ -1.11
USH2AO75445 AC004461.1-201ENST00000412461 403 ntBASIC8.11□□□□□ -1.11
USH2AO75445 ACTG1P14-201ENST00000446382 1122 ntBASIC8.11□□□□□ -1.11
USH2AO75445 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC8.11□□□□□ -1.11
USH2AO75445 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC8.11□□□□□ -1.11
USH2AO75445 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC8.11□□□□□ -1.11
USH2AO75445 AC010336.2-201ENST00000564226 506 ntBASIC8.11□□□□□ -1.11
USH2AO75445 LINC02560-201ENST00000596379 459 ntBASIC8.11□□□□□ -1.11
USH2AO75445 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
USH2AO75445 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC8.11□□□□□ -1.11
USH2AO75445 PC-214ENST00000628663 1470 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms