Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.63■□□□□ 0.57
PMPCBO75439 MIR149-201ENST00000384879 89 ntBASIC18.63■□□□□ 0.57
PMPCBO75439 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.63■□□□□ 0.57
PMPCBO75439 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.63■□□□□ 0.57
PMPCBO75439 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.63■□□□□ 0.57
PMPCBO75439 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 LINC01023-201ENST00000606054 436 ntBASIC18.63■□□□□ 0.57
PMPCBO75439 AL023973.1-201ENST00000624619 620 ntBASIC18.63■□□□□ 0.57
PMPCBO75439 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.63■□□□□ 0.57
PMPCBO75439 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.63■□□□□ 0.57
PMPCBO75439 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PMPCBO75439 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PMPCBO75439 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.63■□□□□ 0.57
PMPCBO75439 AL354751.1-201ENST00000412768 1863 ntBASIC18.63■□□□□ 0.57
PMPCBO75439 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.62■□□□□ 0.57
PMPCBO75439 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.62■□□□□ 0.57
PMPCBO75439 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.62■□□□□ 0.57
PMPCBO75439 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PMPCBO75439 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PMPCBO75439 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.62■□□□□ 0.57
PMPCBO75439 AC005521.1-201ENST00000393351 872 ntBASIC18.62■□□□□ 0.57
PMPCBO75439 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PMPCBO75439 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.62■□□□□ 0.57
PMPCBO75439 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
PMPCBO75439 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
PMPCBO75439 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.62■□□□□ 0.57
PMPCBO75439 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PMPCBO75439 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PMPCBO75439 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PMPCBO75439 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PMPCBO75439 AC018470.1-201ENST00000624790 3129 ntBASIC18.61■□□□□ 0.57
PMPCBO75439 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.61■□□□□ 0.57
PMPCBO75439 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.61■□□□□ 0.57
PMPCBO75439 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.61■□□□□ 0.57
PMPCBO75439 ABALON-201ENST00000629058 1903 ntBASIC18.61■□□□□ 0.57
PMPCBO75439 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.61■□□□□ 0.57
PMPCBO75439 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PMPCBO75439 GMCL1P1-201ENST00000463439 1581 ntBASIC18.61■□□□□ 0.57
PMPCBO75439 AL162741.1-201ENST00000565563 1558 ntBASIC18.61■□□□□ 0.57
PMPCBO75439 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PMPCBO75439 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
PMPCBO75439 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 AP000523.1-201ENST00000398242 1049 ntBASIC18.61■□□□□ 0.57
PMPCBO75439 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.61■□□□□ 0.57
PMPCBO75439 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.61■□□□□ 0.57
PMPCBO75439 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.61■□□□□ 0.57
PMPCBO75439 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.61■□□□□ 0.57
PMPCBO75439 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 AC140113.3-201ENST00000605663 199 ntBASIC18.61■□□□□ 0.57
PMPCBO75439 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.61■□□□□ 0.57
PMPCBO75439 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.61■□□□□ 0.57
PMPCBO75439 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PMPCBO75439 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.61■□□□□ 0.57
PMPCBO75439 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PMPCBO75439 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMPCBO75439 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PMPCBO75439 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PMPCBO75439 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PMPCBO75439 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMPCBO75439 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.6■□□□□ 0.57
PMPCBO75439 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMPCBO75439 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PMPCBO75439 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.6■□□□□ 0.57
PMPCBO75439 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.6■□□□□ 0.57
PMPCBO75439 KRT18P57-201ENST00000443599 1254 ntBASIC18.6■□□□□ 0.57
PMPCBO75439 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.6■□□□□ 0.57
PMPCBO75439 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PMPCBO75439 GCSHP2-201ENST00000560971 527 ntBASIC18.6■□□□□ 0.57
PMPCBO75439 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms