Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 AL133373.2-201ENST00000623187 2828 ntBASIC19.55■□□□□ 0.72
O00370 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 LTB4R2-202ENST00000528054 3092 ntBASIC19.55■□□□□ 0.72
O00370 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
O00370 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
O00370 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.54■□□□□ 0.72
O00370 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
O00370 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.54■□□□□ 0.72
O00370 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 SPDYE15P-201ENST00000424157 909 ntBASIC19.54■□□□□ 0.72
O00370 DUX4L26-201ENST00000489078 1255 ntBASIC19.54■□□□□ 0.72
O00370 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.54■□□□□ 0.72
O00370 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.54■□□□□ 0.72
O00370 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.54■□□□□ 0.72
O00370 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 PCDHB18P-201ENST00000524813 2368 ntBASIC19.54■□□□□ 0.72
O00370 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 AC009102.3-201ENST00000623118 1491 ntBASIC19.54■□□□□ 0.72
O00370 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
O00370 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.53■□□□□ 0.72
O00370 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.53■□□□□ 0.72
O00370 AC063952.2-201ENST00000498792 1227 ntBASIC19.53■□□□□ 0.72
O00370 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
O00370 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.53■□□□□ 0.72
O00370 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
O00370 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
O00370 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
O00370 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
O00370 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.52■□□□□ 0.72
O00370 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.52■□□□□ 0.72
O00370 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
O00370 STARP1-201ENST00000397973 869 ntBASIC19.52■□□□□ 0.72
O00370 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
O00370 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
O00370 RASA4DP-201ENST00000460726 1199 ntBASIC19.52■□□□□ 0.72
O00370 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.52■□□□□ 0.72
O00370 AC034232.1-201ENST00000506026 1064 ntBASIC19.52■□□□□ 0.72
O00370 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
O00370 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.52■□□□□ 0.72
O00370 AC009065.1-201ENST00000564055 1225 ntBASIC19.52■□□□□ 0.72
O00370 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.52■□□□□ 0.72
O00370 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
O00370 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
O00370 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
O00370 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
O00370 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
O00370 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.52■□□□□ 0.72
O00370 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
O00370 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
O00370 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
O00370 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
O00370 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
O00370 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
O00370 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
O00370 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.51■□□□□ 0.71
O00370 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
O00370 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.51■□□□□ 0.71
O00370 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
O00370 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
O00370 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
O00370 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
O00370 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.51■□□□□ 0.71
O00370 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.51■□□□□ 0.71
O00370 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
O00370 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.51■□□□□ 0.71
O00370 KRT18P38-201ENST00000449496 1282 ntBASIC19.51■□□□□ 0.71
O00370 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms