Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DFFAO00273 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.86■□□□□ 0.61
DFFAO00273 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DFFAO00273 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DFFAO00273 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DFFAO00273 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
DFFAO00273 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DFFAO00273 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.86■□□□□ 0.61
DFFAO00273 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DFFAO00273 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.85■□□□□ 0.61
DFFAO00273 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DFFAO00273 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.85■□□□□ 0.61
DFFAO00273 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DFFAO00273 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.85■□□□□ 0.61
DFFAO00273 AC104076.2-201ENST00000448912 469 ntBASIC18.85■□□□□ 0.61
DFFAO00273 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 AC034232.1-201ENST00000506026 1064 ntBASIC18.85■□□□□ 0.61
DFFAO00273 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DFFAO00273 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
DFFAO00273 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 MIR3180-4-201ENST00000582223 153 ntBASIC18.85■□□□□ 0.61
DFFAO00273 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.85■□□□□ 0.61
DFFAO00273 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.85■□□□□ 0.61
DFFAO00273 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
DFFAO00273 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DFFAO00273 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
DFFAO00273 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DFFAO00273 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.84■□□□□ 0.61
DFFAO00273 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.84■□□□□ 0.61
DFFAO00273 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
DFFAO00273 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DFFAO00273 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.84■□□□□ 0.61
DFFAO00273 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DFFAO00273 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.84■□□□□ 0.61
DFFAO00273 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
DFFAO00273 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
DFFAO00273 RNF152P1-201ENST00000397754 604 ntBASIC18.84■□□□□ 0.61
DFFAO00273 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DFFAO00273 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.84■□□□□ 0.61
DFFAO00273 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
DFFAO00273 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.84■□□□□ 0.61
DFFAO00273 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DFFAO00273 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
DFFAO00273 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DFFAO00273 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.84■□□□□ 0.61
DFFAO00273 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
DFFAO00273 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DFFAO00273 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.84■□□□□ 0.61
DFFAO00273 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.84■□□□□ 0.61
DFFAO00273 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DFFAO00273 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
DFFAO00273 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.83■□□□□ 0.61
DFFAO00273 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.83■□□□□ 0.61
DFFAO00273 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.83■□□□□ 0.61
DFFAO00273 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
DFFAO00273 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
DFFAO00273 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DFFAO00273 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DFFAO00273 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DFFAO00273 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DFFAO00273 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
DFFAO00273 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
DFFAO00273 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.83■□□□□ 0.6
DFFAO00273 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
DFFAO00273 TSPY5P-201ENST00000426936 936 ntBASIC18.83■□□□□ 0.6
DFFAO00273 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.83■□□□□ 0.6
DFFAO00273 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.83■□□□□ 0.6
DFFAO00273 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.83■□□□□ 0.6
DFFAO00273 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DFFAO00273 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
DFFAO00273 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms