Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.93■□□□□ 0.46
TAF4O00268 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TAF4O00268 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TAF4O00268 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TAF4O00268 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 PMS2P2-201ENST00000425039 1128 ntBASIC17.93■□□□□ 0.46
TAF4O00268 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.93■□□□□ 0.46
TAF4O00268 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.93■□□□□ 0.46
TAF4O00268 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.93■□□□□ 0.46
TAF4O00268 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TAF4O00268 AP001005.1-201ENST00000571755 1248 ntBASIC17.93■□□□□ 0.46
TAF4O00268 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.93■□□□□ 0.46
TAF4O00268 AC138894.3-201ENST00000603787 634 ntBASIC17.93■□□□□ 0.46
TAF4O00268 AC079602.3-201ENST00000623931 403 ntBASIC17.93■□□□□ 0.46
TAF4O00268 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.93■□□□□ 0.46
TAF4O00268 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.93■□□□□ 0.46
TAF4O00268 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.93■□□□□ 0.46
TAF4O00268 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TAF4O00268 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TAF4O00268 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TAF4O00268 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
TAF4O00268 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.92■□□□□ 0.46
TAF4O00268 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TAF4O00268 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.92■□□□□ 0.46
TAF4O00268 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TAF4O00268 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.92■□□□□ 0.46
TAF4O00268 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.92■□□□□ 0.46
TAF4O00268 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.92■□□□□ 0.46
TAF4O00268 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 PMS2P7-201ENST00000506558 1336 ntBASIC17.92■□□□□ 0.46
TAF4O00268 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.92■□□□□ 0.46
TAF4O00268 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TAF4O00268 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TAF4O00268 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TAF4O00268 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.91■□□□□ 0.46
TAF4O00268 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.91■□□□□ 0.46
TAF4O00268 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TAF4O00268 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TAF4O00268 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TAF4O00268 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 BX842568.4-201ENST00000421222 227 ntBASIC17.91■□□□□ 0.46
TAF4O00268 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.91■□□□□ 0.46
TAF4O00268 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.91■□□□□ 0.46
TAF4O00268 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.91■□□□□ 0.46
TAF4O00268 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TAF4O00268 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TAF4O00268 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TAF4O00268 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.91■□□□□ 0.46
TAF4O00268 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
TAF4O00268 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TAF4O00268 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 DPP3P2-201ENST00000416030 1696 ntBASIC17.9■□□□□ 0.46
TAF4O00268 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.9■□□□□ 0.46
TAF4O00268 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TAF4O00268 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 AC244107.1-201ENST00000442033 332 ntBASIC17.9■□□□□ 0.46
TAF4O00268 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms