Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 AC093525.10-201ENST00000625130 1569 ntBASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 AC004408.2-201ENST00000623613 2777 ntBASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 AC016734.2-201ENST00000624325 1377 ntBASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 AC093503.3-201ENST00000624917 2352 ntBASIC16.69■□□□□ 0.26
NPIPA2E9PIF3 CROCCP3-202ENST00000420820 1947 ntBASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA2E9PIF3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 MTMR9LP-203ENST00000426597 1545 ntBASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 MIR662-201ENST00000384847 95 ntBASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 KRT8P26-201ENST00000534154 1276 ntBASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 ANO7L1-203ENST00000602586 1720 ntBASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
NPIPA2E9PIF3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms