Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 PHGDH-210ENST00000641115 1638 ntBASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 BX664615.1-201ENST00000443558 458 ntBASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.66■□□□□ 0.9
SPDYE4A6NLX3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 CCR12P-201ENST00000446203 998 ntBASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 AC116562.4-202ENST00000641738 218 ntBASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.65■□□□□ 0.9
SPDYE4A6NLX3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPDYE4A6NLX3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPDYE4A6NLX3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.64■□□□□ 0.9
SPDYE4A6NLX3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.64■□□□□ 0.9
SPDYE4A6NLX3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SPDYE4A6NLX3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms