Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SBNO1A3KN83 PMP22-202ENST00000395936 816 ntTSL 3 BASIC24.76■■□□□ 1.55
SBNO1A3KN83 KIRREL3-AS3-201ENST00000404882 831 ntBASIC24.76■■□□□ 1.55
SBNO1A3KN83 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.76■■□□□ 1.55
SBNO1A3KN83 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.76■■□□□ 1.55
SBNO1A3KN83 AC083906.6-201ENST00000641366 219 ntBASIC24.76■■□□□ 1.55
SBNO1A3KN83 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SBNO1A3KN83 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SBNO1A3KN83 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SBNO1A3KN83 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
SBNO1A3KN83 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
SBNO1A3KN83 AL161938.1-201ENST00000569833 2180 ntBASIC24.75■■□□□ 1.55
SBNO1A3KN83 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
SBNO1A3KN83 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.75■■□□□ 1.55
SBNO1A3KN83 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
SBNO1A3KN83 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.75■■□□□ 1.55
SBNO1A3KN83 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC24.75■■□□□ 1.55
SBNO1A3KN83 AC107918.4-202ENST00000641623 219 ntBASIC24.75■■□□□ 1.55
SBNO1A3KN83 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SBNO1A3KN83 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.74■■□□□ 1.55
SBNO1A3KN83 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SBNO1A3KN83 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.74■■□□□ 1.55
SBNO1A3KN83 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.74■■□□□ 1.55
SBNO1A3KN83 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC24.74■■□□□ 1.55
SBNO1A3KN83 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC24.74■■□□□ 1.55
SBNO1A3KN83 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SBNO1A3KN83 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
SBNO1A3KN83 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SBNO1A3KN83 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC24.74■■□□□ 1.55
SBNO1A3KN83 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC24.74■■□□□ 1.55
SBNO1A3KN83 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
SBNO1A3KN83 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SBNO1A3KN83 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 UNC93B6-202ENST00000528242 690 ntBASIC24.73■■□□□ 1.55
SBNO1A3KN83 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 AC105339.3-201ENST00000560043 636 ntBASIC24.73■■□□□ 1.55
SBNO1A3KN83 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 MIR3687-2-201ENST00000577708 61 ntBASIC24.73■■□□□ 1.55
SBNO1A3KN83 MIR3687-1-201ENST00000614492 61 ntBASIC24.73■■□□□ 1.55
SBNO1A3KN83 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 AC134684.3-201ENST00000641758 218 ntBASIC24.73■■□□□ 1.55
SBNO1A3KN83 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SBNO1A3KN83 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.73■■□□□ 1.55
SBNO1A3KN83 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SBNO1A3KN83 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SBNO1A3KN83 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SBNO1A3KN83 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.72■■□□□ 1.55
SBNO1A3KN83 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC24.72■■□□□ 1.55
SBNO1A3KN83 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC24.72■■□□□ 1.55
SBNO1A3KN83 AC079781.4-201ENST00000641908 219 ntBASIC24.72■■□□□ 1.55
SBNO1A3KN83 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SBNO1A3KN83 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SBNO1A3KN83 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
SBNO1A3KN83 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24.72■■□□□ 1.55
SBNO1A3KN83 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SBNO1A3KN83 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SBNO1A3KN83 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SBNO1A3KN83 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SBNO1A3KN83 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 RNA5SP416-201ENST00000516838 111 ntBASIC24.71■■□□□ 1.55
SBNO1A3KN83 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SBNO1A3KN83 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
SBNO1A3KN83 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SBNO1A3KN83 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
SBNO1A3KN83 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
SBNO1A3KN83 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
SBNO1A3KN83 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SBNO1A3KN83 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.55
SBNO1A3KN83 COA5-202ENST00000409997 557 ntTSL 4 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
SBNO1A3KN83 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.7■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms