Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC162PA2VCL2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCDC162PA2VCL2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC162PA2VCL2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 AC211429.1-201ENST00000415277 523 ntBASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC162PA2VCL2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 LIN28AP1-201ENST00000429574 405 ntBASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 AC009065.1-201ENST00000564055 1225 ntBASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 AC005363.2-201ENST00000618631 242 ntBASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC162PA2VCL2 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC162PA2VCL2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC162PA2VCL2 AC018470.1-201ENST00000624790 3129 ntBASIC18.3■□□□□ 0.52
CCDC162PA2VCL2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC162PA2VCL2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms