Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FAM8A6P-201ENST00000407496 1135 ntBASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL162741.1-201ENST00000565563 1558 ntBASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRBV4S1A1TA0A5B7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC126763.1-201ENST00000552015 2118 ntBASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC005332.8-201ENST00000622750 2735 ntBASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 HEIH-201ENST00000623091 1652 ntBASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC009947.2-201ENST00000444014 672 ntBASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC091076.1-201ENST00000610741 619 ntBASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.74□□□□□ -0.05
TCRBV4S1A1TA0A5B7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms