Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.64■□□□□ 0.42
AP4B1Q9Y6B7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4B1Q9Y6B7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
AP4B1Q9Y6B7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.64■□□□□ 0.42
AP4B1Q9Y6B7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4B1Q9Y6B7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.64■□□□□ 0.42
AP4B1Q9Y6B7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 SLC25A6P5-201ENST00000435663 894 ntBASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 AD000864.1-201ENST00000624076 2295 ntBASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4B1Q9Y6B7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 AC108860.2-201ENST00000562760 2183 ntBASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 C1QL1P1-201ENST00000568105 661 ntBASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 Z99916.2-201ENST00000604037 246 ntBASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 AL353708.3-201ENST00000610272 989 ntBASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP4B1Q9Y6B7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.62■□□□□ 0.41
AP4B1Q9Y6B7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms