Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 MIR1224-201ENST00000408193 85 ntBASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 KRT18P21-201ENST00000515767 1272 ntBASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 EGLN1P1-201ENST00000531623 762 ntBASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGB3Q9Y5G1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 TSPY14P-201ENST00000303979 915 ntBASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 AC010947.1-201ENST00000623454 693 ntBASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGB3Q9Y5G1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 RCC2P3-201ENST00000418112 1537 ntBASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 AC112777.1-201ENST00000540175 1423 ntBASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 KRT8P9-201ENST00000558927 1449 ntBASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 AC113347.1-201ENST00000413321 391 ntBASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 AC067852.2-201ENST00000590513 2313 ntBASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 AL109659.2-201ENST00000606809 1674 ntBASIC17.42■□□□□ 0.38
PCDHGB3Q9Y5G1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms