Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB7Q9Y5E2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 AC023511.2-201ENST00000618803 211 ntBASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 SDHAP2-201ENST00000455183 2001 ntBASIC19.71■□□□□ 0.75
PCDHB7Q9Y5E2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 RCN1P2-201ENST00000398357 915 ntBASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 AF186996.4-201ENST00000467186 377 ntBASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 GPALPP1-207ENST00000611650 899 ntBASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHB7Q9Y5E2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 SLC25A24-204ENST00000569674 2357 ntBASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 AC008608.2-201ENST00000606089 416 ntBASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHB7Q9Y5E2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 TP73-AS1-210ENST00000637775 1455 ntBASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 AL031284.1-201ENST00000419297 478 ntBASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 KRT18P67-201ENST00000432816 1264 ntBASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHB7Q9Y5E2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms