Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 GPR32P1-201ENST00000601788 811 ntBASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 AL390719.2-201ENST00000606993 987 ntBASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.72■□□□□ 0.75
SSX2IPQ9Y2D8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 TOB2P1-201ENST00000469761 992 ntBASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 AC104819.1-201ENST00000504587 486 ntBASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 AC024563.2-201ENST00000603282 481 ntBASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 HTR7P1-202ENST00000624664 4411 ntBASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSX2IPQ9Y2D8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 GUSBP12-201ENST00000513727 720 ntBASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 IFNL4P1-201ENST00000607083 540 ntBASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SSX2IPQ9Y2D8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 AC141586.3-201ENST00000562166 1838 ntBASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 UNC93B7-201ENST00000509439 705 ntBASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 Z69720.1-201ENST00000601483 472 ntBASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.69■□□□□ 0.74
SSX2IPQ9Y2D8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 PKD1P1-201ENST00000458669 6805 ntBASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 KRT89P-201ENST00000620027 1478 ntBASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSX2IPQ9Y2D8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms