Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CDK11AQ9UQ88 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 RPL13AP23-201ENST00000480739 586 ntBASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 RPL18-209ENST00000550645 463 ntTSL 5 BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 RPL18-214ENST00000552588 559 ntTSL 3 BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 AL161938.1-201ENST00000569833 2180 ntBASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC28.28■■■□□ 2.12
CDK11AQ9UQ88 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 AC125634.1-201ENST00000438758 1403 ntBASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 HNRNPDP1-201ENST00000439535 754 ntBASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDK11AQ9UQ88 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
CDK11AQ9UQ88 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CDK11AQ9UQ88 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
CDK11AQ9UQ88 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
CDK11AQ9UQ88 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CDK11AQ9UQ88 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CDK11AQ9UQ88 SNAI3-AS1-205ENST00000568633 2096 ntBASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 PMS2P7-201ENST00000506558 1336 ntBASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 PIN1-206ENST00000587625 878 ntTSL 2 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 AP005117.1-201ENST00000584346 1413 ntBASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDK11AQ9UQ88 ZNF259P1-201ENST00000407656 1365 ntBASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 RBSN-204ENST00000449050 903 ntTSL 2 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 POLD2P1-201ENST00000511220 997 ntBASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CDK11AQ9UQ88 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms