Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 AC005252.3-201ENST00000623855 2258 ntBASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 AC138028.4-201ENST00000564984 1845 ntBASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC9.4□□□□□ -0.91
CDC42SE1Q9NRR8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 LINC01529-204ENST00000636474 1715 ntBASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 BX119927.1-201ENST00000636596 1552 ntBASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ANO7L1-203ENST00000602586 1720 ntBASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms