Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 AL390955.1-201ENST00000428694 934 ntBASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 TSPY15P-201ENST00000457163 923 ntBASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 AP005242.2-201ENST00000580065 1175 ntBASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 AC008622.2-201ENST00000617006 1229 ntBASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTPS2Q9NRF8 NOC2LP2-201ENST00000407594 1944 ntBASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 MIR1238-201ENST00000408483 83 ntBASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 AC112777.1-201ENST00000540175 1423 ntBASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTPS2Q9NRF8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTPS2Q9NRF8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 KRT8P45-201ENST00000414328 1447 ntBASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 FITM1-202ENST00000559294 800 ntBASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTPS2Q9NRF8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTPS2Q9NRF8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms