Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VAT1LQ9HCJ6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 Z83836.1-201ENST00000624605 1642 ntBASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 TSPY22P-201ENST00000427496 604 ntBASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 AC016734.2-201ENST00000624325 1377 ntBASIC21.22■□□□□ 0.99
VAT1LQ9HCJ6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 HCG11-201ENST00000411553 5696 ntBASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 BX276092.5-203ENST00000456199 560 ntBASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.21■□□□□ 0.99
VAT1LQ9HCJ6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.2■□□□□ 0.99
VAT1LQ9HCJ6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
VAT1LQ9HCJ6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
VAT1LQ9HCJ6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.2■□□□□ 0.99
VAT1LQ9HCJ6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 WIZP1-201ENST00000531444 2299 ntBASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VAT1LQ9HCJ6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.19■□□□□ 0.98
VAT1LQ9HCJ6 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms