Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SND1-IT1Q9HBX3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SND1-IT1Q9HBX3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 FLJ16779-201ENST00000612722 7638 ntBASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 AL050303.2-201ENST00000619798 666 ntBASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 AL121829.2-201ENST00000620908 328 ntBASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 AC124067.4-201ENST00000519691 2379 ntBASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SND1-IT1Q9HBX3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 AC084018.2-201ENST00000613093 2607 ntBASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 TSPY23P-201ENST00000440136 739 ntBASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 AC080038.1-201ENST00000611274 1154 ntBASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 AC092118.2-201ENST00000613495 667 ntBASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 HEIH-201ENST00000623091 1652 ntBASIC12.29□□□□□ -0.44
SND1-IT1Q9HBX3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms