Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 ZNF444P1-201ENST00000559497 298 ntBASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC4Q9HBW1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 HLA-F-220ENST00000434407 884 ntBASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 AC083849.1-201ENST00000615227 514 ntBASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRRC4Q9HBW1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 AL121956.5-201ENST00000625261 221 ntBASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC4Q9HBW1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC4Q9HBW1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms