Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 AC083906.6-201ENST00000641366 219 ntBASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP1Q9H5V8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 HLA-F-220ENST00000434407 884 ntBASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AC069148.1-201ENST00000608741 768 ntBASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP1Q9H5V8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.09■□□□□ 0.33
CDCP1Q9H5V8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDCP1Q9H5V8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.08■□□□□ 0.33
CDCP1Q9H5V8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.08■□□□□ 0.33
CDCP1Q9H5V8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.08■□□□□ 0.33
CDCP1Q9H5V8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CDCP1Q9H5V8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.08■□□□□ 0.33
CDCP1Q9H5V8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CDCP1Q9H5V8 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms